STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24632.1Phenylacetic acid degradation protein PaaN. (573 aa)    
Predicted Functional Partners:
EFL24631.1
3-hydroxyacyl-CoA dehydrogenase PaaC.
 
  0.886
EFL20777.1
Polyketide synthase.
  
 0.848
EFL28210.1
Erythronolide synthase, modules 5 and 6 (ORF 3) (6-deoxyerythronolide B synthase III) (DEBS 3).
  
 0.848
EFL29011.1
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.830
EFL24630.1
Putative TetR-family transcriptional regulator.
    
  0.806
EFL27601.1
Polyketide synthase; Truncated CDS.
  
 0.799
EFL28177.1
Linear gramicidin synthetase LgrC.
  
 0.797
EFL28178.1
Non-ribosomal peptide synthetase; Unextendable partial coding region.
  
 0.797
EFL28179.1
Putative phosphopantetheine attachment site; Unextendable partial coding region.
  
 0.797
EFL26930.1
Glutamate synthase large subunit.
  
 
 0.789
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.