Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL24640.1phenylacetate-CoA oxygenase, PaaJ subunit. (171 aa)    
Predicted Functional Partners:
EFL24638.1
phenylacetate-CoA oxygenase, PaaG subunit.
 
 
 0.999
EFL24639.1
phenylacetate-CoA oxygenase, PaaI subunit.
 
 
 0.999
EFL24641.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
 
 
 0.996
EFL29011.1
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
  
 0.992
EFL29012.1
Phenylacetic acid degradation protein PaaD.
 
 
 0.985
EFL23443.1
Phenylacetate degradation probable enoyl-CoA hydratase PaaB.
 
 
 0.925
EFL23956.1
Phenylacetate degradation probable enoyl-CoA hydratase PaaB.
 
 
 0.894
EFL27022.1
NifU family SUF system FeS assembly protein.
  
  
 0.777
EFL29247.1
Vanillate O-demethylase oxidoreductase.
 
 
 0.775
EFL24636.1
Putative membrane protein; Overlaps another CDS with the same product name.
       0.760
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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