STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24640.1phenylacetate-CoA oxygenase, PaaJ subunit. (171 aa)    
Predicted Functional Partners:
EFL24638.1
phenylacetate-CoA oxygenase, PaaG subunit.
 
 
 0.999
EFL24639.1
phenylacetate-CoA oxygenase, PaaI subunit.
 
 
 0.999
EFL24641.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
 
 
 0.997
EFL29011.1
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
  
 0.995
EFL29012.1
Phenylacetic acid degradation protein PaaD.
 
 
 0.989
EFL23443.1
Phenylacetate degradation probable enoyl-CoA hydratase PaaB.
 
 
 0.940
EFL23956.1
Phenylacetate degradation probable enoyl-CoA hydratase PaaB.
 
 
 0.915
EFL24636.1
Putative membrane protein; Overlaps another CDS with the same product name.
       0.783
EFL24637.1
Putative membrane protein; Overlaps another CDS with the same product name.
       0.783
EFL29247.1
Vanillate O-demethylase oxidoreductase.
 
 
 0.771
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.