STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24653.1Penicillin binding protein transpeptidase domain protein. (488 aa)    
Predicted Functional Partners:
EFL24652.1
Cell division protein FtsW; Belongs to the SEDS family.
 
 0.998
EFL26142.1
Rod shape-determining protein RodA; Belongs to the SEDS family.
 
 0.899
EFL24650.1
Putative FHA domain protein.
 
   
 0.892
EFL24649.1
FHA domain protein; Truncated CDS; unextendable partial coding region.
 
   
 0.865
ftsQ
Cell division protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
 
 
 0.852
EFL24651.1
Putative protein phosphatase; Truncated CDS; unextendable partial coding region.
 
  
 0.845
EFL26855.1
Penicillin binding protein transpeptidase domain protein.
  
  
0.836
EFL26141.1
Penicillin-binding protein 2.
  
  
 
0.780
EFL24927.1
Penicillin-binding protein.
 
 
0.776
EFL24697.1
Peptidoglycan glycosyltransferase.
 
 
0.721
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.