Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL24658.1Putative membrane protein. (63 aa)    
Predicted Functional Partners:
EFL24657.1
Anthranilate synthase component II.
       0.882
EFL24659.1
Putative integral membrane protein.
 
   
 0.878
EFL24655.1
Putative integral membrane protein.
 
   
 0.796
EFL24656.1
Putative integral membrane protein.
 
   
 0.757
EFL20340.1
Putative integral membrane protein.
  
     0.498
EFL25753.1
Putative integral membrane protein.
 
   
 0.478
EFL27162.1
Putative membrane protein.
  
     0.455
EFL24299.1
Putative secreted protein.
  
     0.439
EFL24308.1
Putative AmfC protein.
  
     0.418
EFL24416.1
Putative integral membrane protein.
  
   
 0.416
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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