STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24686.1Thioredoxin; Belongs to the thioredoxin family. (109 aa)    
Predicted Functional Partners:
EFL24687.1
Thioredoxin-disulfide reductase.
 0.997
EFL27705.1
Putative thioredoxin reductase.
 
 0.911
EFL22809.1
Sensor histidine kinase/response regulator.
  
 0.874
EFL24689.1
RNA polymerase sigma-70 factor, ECF subfamily.
     
 0.789
EFL28378.1
Pyridine nucleotide-disulfide oxidoreductase.
  
 0.772
EFL29334.1
Pyridine nucleotide-disulfide oxidoreductase domain protein.
  
 0.758
EFL24688.1
Putative membrane protein.
  
    0.754
EFL23764.1
Translation initiation factor IF-2; Truncated CDS; unextendable partial coding region.
  
 0.737
EFL24690.1
Conserved hypothetical protein.
  
    0.733
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
 0.724
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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