STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24690.1Conserved hypothetical protein. (578 aa)    
Predicted Functional Partners:
EFL24688.1
Putative membrane protein.
 
 
   0.925
EFL24691.1
Integral membrane protein MviN.
    0.895
EFL24689.1
RNA polymerase sigma-70 factor, ECF subfamily.
   
 
 0.873
EFL22809.1
Sensor histidine kinase/response regulator.
   
 0.804
EFL28982.1
Protein phosphatase.
 
 0.795
EFL24649.1
FHA domain protein; Truncated CDS; unextendable partial coding region.
  
 
   0.761
EFL24687.1
Thioredoxin-disulfide reductase.
       0.755
EFL24692.1
Putative membrane protein.
 
     0.746
EFL25643.1
Serine/threonine-protein kinase PkaA.
  
     0.743
EFL24686.1
Thioredoxin; Belongs to the thioredoxin family.
  
    0.733
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.