Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
EFL24692.1Putative membrane protein. (778 aa)    
Predicted Functional Partners:
EFL24688.1
Putative membrane protein.
 
     0.919
EFL24691.1
Integral membrane protein MviN.
 
     0.841
EFL22809.1
Sensor histidine kinase/response regulator.
   
 0.804
EFL25620.1
Lipoprotein LpqB; Truncated CDS; unextendable partial coding region.
  
 
   0.792
EFL25602.1
Putative secreted protein.
 
   
 0.769
EFL24990.1
Putative thymidylate kinase.
  
     0.759
EFL27029.1
Conserved hypothetical protein.
  
     0.754
EFL24693.1
tRNA adenylyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.753
EFL23167.1
Large Ala/Glu-rich protein.
  
     0.751
EFL27131.1
Conserved hypothetical protein.
  
     0.751
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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