STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24708.1Zinc-binding dehydrogenase family oxidoreductase. (335 aa)    
Predicted Functional Partners:
EFL27322.1
Putative phosphotransferase.
 
    0.568
EFL24709.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.532
EFL25157.1
Putative NADPH quinone oxidoreductase protein.
  
    0.528
EFL29357.1
Zinc-binding dehydrogenase family oxidoreductase.
  
    0.519
EFL27809.1
Oxidoreductase.
  
    0.509
EFL26671.1
Oxidoreductase.
  
    0.478
EFL26337.1
Putative oxidoreductase.
  
    0.470
EFL29102.1
Phosphotransferase.
 
    0.466
EFL27321.1
acyl-CoA dehydrogenase.
  
     0.443
EFL27828.1
Zinc-binding alcohol dehydrogenase.
  
    0.433
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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