STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24727.1Putative membrane protein. (126 aa)    
Predicted Functional Partners:
EFL24728.1
Putative cupin domain protein.
       0.792
EFL24725.1
Cys/Met metabolism PLP-dependent enzyme family protein.
       0.787
EFL24726.1
Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.787
EFL25275.1
PspC domain protein.
  
    0.765
EFL25278.1
Putative two-component system sensor kinase.
  
    0.765
EFL25451.1
Putative membrane protein.
  
    0.765
EFL24729.1
Putative membrane protein.
       0.706
EFL24730.1
Putative regulator.
     
 0.702
EFL24723.1
Putative hydrolase, NUDIX family.
       0.664
EFL24864.1
Putative IclR-family transcriptional regulator.
       0.572
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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