STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24728.1Putative cupin domain protein. (105 aa)    
Predicted Functional Partners:
EFL27778.1
Putative glucosyltransferase.
  
 
 0.906
EFL24727.1
Putative membrane protein.
       0.812
EFL24725.1
Cys/Met metabolism PLP-dependent enzyme family protein.
    
  0.806
EFL24729.1
Putative membrane protein.
       0.778
EFL24726.1
Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     
 0.759
EFL24723.1
Putative hydrolase, NUDIX family.
 
     0.722
EFL21385.1
Mannose-1-phosphate guanyltransferase.
  
 
 0.709
EFL24730.1
Putative regulator.
       0.697
EFL25254.1
Conserved hypothetical protein.
  
     0.655
EFL21218.1
Putative methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
  0.645
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.