STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24742.1GAF family protein. (374 aa)    
Predicted Functional Partners:
EFL22809.1
Sensor histidine kinase/response regulator.
  
 0.989
EFL24743.1
Sensor kinase, two-component system; Unextendable partial coding region.
  
  0.975
EFL27138.1
Sensor histidine kinase/response regulator.
  
 0.953
EFL24615.1
LuxR family DNA-binding response regulator.
 
  0.855
EFL24741.1
Transport ATP-binding protein CydC.
 
     0.832
EFL20992.1
LuxR family DNA-binding response regulator.
 
  0.821
EFL21490.1
LuxR family DNA-binding response regulator.
 
  0.807
EFL20670.1
Sensor histidine kinase/response regulator.
  
 0.773
EFL27779.1
Putative PAS fold protein.
   
 0.764
EFL23001.1
Pas:ggdef.
  
 0.760
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.