STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24748.1Conserved hypothetical protein. (196 aa)    
Predicted Functional Partners:
htpX-2
Protease HTPX; Belongs to the peptidase M48B family.
 
     0.957
EFL26775.1
Transcription regulator.
 
     0.794
EFL26776.1
Conserved hypothetical protein.
 
     0.792
EFL24745.1
Conserved hypothetical protein.
       0.770
EFL24746.1
Cof protein.
       0.720
EFL24749.1
Conserved hypothetical protein.
 
     0.632
EFL28321.1
Putative membrane protein.
  
     0.620
EFL23426.1
Conserved hypothetical protein.
  
     0.524
EFL25526.1
Conserved hypothetical protein.
  
     0.445
EFL24649.1
FHA domain protein; Truncated CDS; unextendable partial coding region.
  
     0.439
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.