STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24751.1Putative ABC transporter ATP-binding protein. (330 aa)    
Predicted Functional Partners:
EFL24752.1
Putative integral membrane protein.
 
  0.981
EFL24754.1
Putative integral membrane protein.
 
 0.981
EFL24753.1
Putative ABC transporter ATP-binding protein.
 
    
0.906
EFL24750.1
Short-chain dehydrogenase/reductase family oxidoreductase.
       0.772
EFL24435.1
ABC transporter membrane-spanning protein.
  
 
 0.661
EFL24746.1
Cof protein.
   
   0.603
EFL23431.1
Conserved hypothetical protein.
  
     0.592
EFL24745.1
Conserved hypothetical protein.
       0.572
EFL28980.1
Conserved hypothetical protein.
       0.572
EFL22960.1
Conserved hypothetical protein.
  
     0.571
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.