STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24757.1Putative transcriptional regulatory protein. (337 aa)    
Predicted Functional Partners:
EFL21916.1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
  
 
 0.631
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
    
  0.591
EFL24756.1
EmrB/QacA family drug resistance transporter; Truncated CDS.
       0.571
EFL28402.1
Putative two-component sensor histidine kinase; Unextendable partial coding region.
  
     0.482
EFL24758.1
Putative secreted protein.
       0.443
EFL24884.1
Winged helix family transcriptional regulator.
  
    0.431
EFL24023.1
Putative membrane protein.
  
     0.415
EFL21910.1
Hypothetical protein.
  
     0.404
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.