STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24758.1Putative secreted protein. (149 aa)    
Predicted Functional Partners:
EFL29054.1
Putative alpha-arabinofuranosidase II.
  
     0.620
EFL28976.1
Conserved hypothetical protein.
  
    0.604
EFL27104.1
Putative pectate lyase.
  
    0.527
EFL23146.1
Hypothetical hydrophilic protein.
  
     0.522
EFL28744.1
Putative M6 family metalloprotease domain protein.
  
     0.517
EFL25970.1
Putative cupin domain protein.
  
     0.503
EFL26515.1
Putative S-layer domain protein.
  
     0.479
EFL20955.1
FG-GAP repeat domain-containing protein.
  
  
  0.478
EFL28581.1
streptogrisin-D (Serine protease D) (SGPD).
  
     0.470
EFL26074.1
Putative ATP-binding protein SCC61A.06c; Unextendable partial coding region.
  
     0.452
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.