STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24762.1Tat-translocated enzyme. (288 aa)    
Predicted Functional Partners:
EFL24764.1
Conserved hypothetical protein.
  
  
 0.959
EFL24763.1
Putative integral membrane protein.
 
  
 0.956
EFL26644.1
Lipoprotein.
 
  
 0.938
EFL25856.1
Iron permease FTR1.
 
  
 0.933
EFL26642.1
Ferrous iron permease EfeU.
 
  
 0.924
EFL24765.1
SCO1/SenC family protein.
  
    0.895
EFL27277.1
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Truncated CDS.
  
 
  0.693
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
     
 0.604
EFL24766.1
Nuclear export factor GLE1.
       0.550
EFL20293.1
Putative membrane protein.
  
    0.496
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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