STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24767.1Putative integral membrane protein. (291 aa)    
Predicted Functional Partners:
EFL24768.1
Putative serine/threonine kinase anti-sigma factor.
 
     0.825
EFL24766.1
Nuclear export factor GLE1.
       0.778
EFL21109.1
Conserved hypothetical protein.
  
     0.758
EFL24765.1
SCO1/SenC family protein.
 
     0.742
EFL22315.1
PAS domain protein.
  
     0.728
EFL23439.1
Putative membrane protein.
  
     0.715
EFL25251.1
Conserved hypothetical protein.
  
     0.715
EFL24763.1
Putative integral membrane protein.
       0.707
EFL24764.1
Conserved hypothetical protein.
       0.707
EFL25210.1
Conserved hypothetical protein; Unextendable partial coding region.
  
     0.703
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.