STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24768.1Putative serine/threonine kinase anti-sigma factor. (159 aa)    
Predicted Functional Partners:
EFL24767.1
Putative integral membrane protein.
 
     0.843
EFL23179.1
Putative anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
  0.764
EFL24766.1
Nuclear export factor GLE1.
       0.737
EFL21604.1
Conserved hypothetical protein.
  
     0.719
EFL24769.1
Putative serine/threonine protein kinase.
   
   0.702
EFL24765.1
SCO1/SenC family protein.
  
    0.699
EFL24983.1
anti-sigma-B factor antagonist (Anti-anti-sigma-B factor); Belongs to the anti-sigma-factor antagonist family.
  
  0.699
EFL24763.1
Putative integral membrane protein.
       0.696
EFL24764.1
Conserved hypothetical protein.
       0.696
EFL23497.1
Putative membrane protein.
 
 0.689
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.