STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24777.1Putative regulatory protein. (242 aa)    
Predicted Functional Partners:
EFL23325.1
Putative STAS domain protein; Belongs to the anti-sigma-factor antagonist family.
  
  0.856
EFL24778.1
Lycerophosphoryl diester phosphodiesterase.
       0.822
EFL25256.1
Putative anti anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
  0.804
EFL23324.1
Putative anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
  0.790
EFL24776.1
Conserved hypothetical protein.
       0.774
EFL24983.1
anti-sigma-B factor antagonist (Anti-anti-sigma-B factor); Belongs to the anti-sigma-factor antagonist family.
  
  0.745
EFL26121.1
Putative integral membrane protein.
  
  0.726
EFL23360.1
Putative HD domain protein.
  
    0.720
EFL25653.1
Putative regulator.
  
  0.710
EFL23179.1
Putative anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
  0.708
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.