STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24781.1Integrase; Truncated CDS. (81 aa)    
Predicted Functional Partners:
EFL24782.1
Hypothetical protein.
       0.752
EFL23140.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
 0.675
EFL23062.1
Putative toxin-antitoxin system, toxin component.
  
     0.610
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
     
  0.602
EFL24784.1
HTH_3 family transcriptional regulator.
     
 0.593
EFL24783.1
Hypothetical protein.
       0.589
EFL23292.1
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
     
 0.578
EFL23115.1
Conserved hypothetical protein.
  
     0.555
EFL21672.1
Putative toxin-antitoxin system, toxin component.
  
     0.547
EFL27276.1
Putative ArsR family Transcriptional regulator.
  
     0.546
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.