STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24784.1HTH_3 family transcriptional regulator. (82 aa)    
Predicted Functional Partners:
EFL24783.1
Hypothetical protein.
       0.792
EFL21510.1
Conserved hypothetical protein.
   
 
 0.760
EFL24008.1
Conserved hypothetical protein.
   
 
 0.760
EFL28639.1
PE-PGRS family protein.
   
 
 0.760
hmtR
Putative transporter.
 
   
 0.656
EFL24782.1
Hypothetical protein.
       0.605
EFL24781.1
Integrase; Truncated CDS.
     
 0.590
hmtQ
ABC-type efflux protein, ATP-binding protein.
 
     0.530
EFL24625.1
Putative molybdopterin-guanine dinucleotide biosynthesis protein; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.
    
  0.508
EFL23898.1
Putative tetratricopeptide repeat protein.
    
  0.496
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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