STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24796.1TetR family transcriptional regulator. (210 aa)    
Predicted Functional Partners:
EFL24795.1
NAD dependent epimerase/dehydratase.
 
     0.943
EFL21233.1
Short-chain dehydrogenase/reductase family oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
   
 0.760
EFL24503.1
TetR family transcriptional regulator.
 
   
 0.687
EFL20481.1
TetR family transcriptional regulator.
 
   
 0.686
EFL27893.1
TetR family transcriptional regulator.
  
   
 0.539
EFL21232.1
TetR family transcriptional regulator.
  
   
 0.529
EFL21615.1
TetR family transcriptional regulator.
  
   
 0.505
EFL28637.1
Conserved hypothetical protein.
  
     0.501
EFL28268.1
Glyoxalase.
  
     0.464
EFL24007.1
TetR family transcriptional regulator.
  
     0.443
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.