STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24802.1Putative MaoC like domain protein. (139 aa)    
Predicted Functional Partners:
EFL24800.1
Conserved hypothetical protein.
 0.999
EFL24803.1
Nonspecific lipid-transfer protein; Truncated CDS.
 
 0.985
EFL23935.1
Conserved hypothetical protein.
 
 0.981
EFL23953.1
DUF35 domain-containing protein.
 
 0.969
EFL28054.1
Conserved hypothetical protein.
 
 0.962
EFL24799.1
Putative acyl-CoA dehydrogenase.
 
 0.951
EFL23934.1
Nonspecific lipid-transfer protein.
 
 0.936
EFL24801.1
acyl-CoA dehydrogenase.
 
 0.914
EFL21456.1
Conserved hypothetical protein.
 
  0.894
EFL21454.1
Nonspecific lipid-transfer protein.
 
 0.867
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.