STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24804.1Conserved hypothetical protein. (282 aa)    
Predicted Functional Partners:
EFL24800.1
Conserved hypothetical protein.
       0.830
EFL24801.1
acyl-CoA dehydrogenase.
       0.830
EFL24806.1
medium-chain-fatty-acid-CoA ligase.
 
     0.789
EFL24805.1
RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.
       0.771
EFL24802.1
Putative MaoC like domain protein.
       0.666
EFL24803.1
Nonspecific lipid-transfer protein; Truncated CDS.
       0.666
EFL24799.1
Putative acyl-CoA dehydrogenase.
       0.640
EFL28791.1
Conserved hypothetical protein.
  
     0.619
EFL24699.1
Alanine racemase domain-containing protein.
  
     0.597
EFL24341.1
Putative integral membrane protein.
  
  
  0.596
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.