STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24808.1Putative secreted protein. (149 aa)    
Predicted Functional Partners:
EFL25322.1
Putative integral membrane protein.
  
     0.597
EFL24807.1
Putative two-component system sensor kinase/response regulator, bifunctional protein.
       0.572
EFL23563.1
Flp pilus assembly protein CpaB.
  
     0.517
EFL24449.1
Conserved hypothetical protein.
  
     0.504
EFL23426.1
Conserved hypothetical protein.
  
     0.471
EFL20938.1
Putative sugar kinase; Truncated CDS.
  
     0.464
EFL23189.1
Putative secreted/membrane protein.
  
     0.463
EFL25620.1
Lipoprotein LpqB; Truncated CDS; unextendable partial coding region.
  
     0.449
EFL23160.1
Conserved hypothetical protein.
  
     0.433
EFL24027.1
Putative membrane protein.
  
     0.430
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.