STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24813.1Probable F420-dependent oxidoreductase, MSMEG_4141 family. (293 aa)    
Predicted Functional Partners:
EFL26388.1
Thioredoxin; Belongs to the thioredoxin family.
   
    0.715
EFL21630.1
Non-ribosomal peptide synthetase.
   
 0.667
EFL25760.1
Conserved hypothetical protein; Belongs to the UPF0303 family.
       0.605
EFL25761.1
Oxidoreductase family, NAD-binding Rossmann fold domain protein.
       0.605
EFL25762.1
Putative ROK-family transcriptional regulator.
       0.605
EFL27665.1
N5,N10-methylenetetrahydromethanopterin reductase-related protein.
  
     0.602
EFL24814.1
DNA-binding response regulator TrcR.
       0.577
EFL28555.1
Conserved hypothetical protein.
  
  
 0.562
EFL25129.1
PPOX class probable F420-dependent enzyme.
  
     0.561
EFL28416.1
Probable F420-dependent oxidoreductase family protein.
  
     0.551
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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