STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24821.1Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. (861 aa)    
Predicted Functional Partners:
EFL24822.1
Putative MarR-family transcriptional regulator.
 
   
 0.823
EFL24877.1
Non-specific serine/threonine protein kinase.
    
 0.709
EFL28844.1
Ser/Thr protein phosphatase; Truncated CDS.
    
  0.705
EFL23142.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
    0.645
EFL26947.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
    0.645
EFL24823.1
Putative membrane protein.
     
 0.519
EFL27376.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
  0.493
EFL24820.1
Conserved hypothetical protein; Belongs to the UPF0312 family.
       0.487
EFL21634.1
Non-ribosomal peptide synthetase/polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.478
EFL21630.1
Non-ribosomal peptide synthetase.
  
 
 0.460
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.