STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24834.1Transcriptional regulator, XRE family with cupin sensor. (194 aa)    
Predicted Functional Partners:
EFL27833.1
DNA-binding protein.
  
 
  0.771
EFL24833.1
GNAT family toxin-antitoxin system, toxin component.
    
  0.637
EFL20490.1
GNAT family acetyltransferase.
    
  0.579
EFL21546.1
Xre family toxin-antitoxin system, antitoxin component.
  
 
  0.554
EFL21160.1
cro/CI family transcriptional regulator.
 
0.547
EFL22321.1
Catalase HPII.
    
  0.541
EFL20737.1
Xre family toxin-antitoxin system, antitoxin component.
  
    0.532
EFL23529.1
Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.495
EFL22360.1
NAD-dependent deacetylase 2.
  
 
  0.485
EFL27741.1
Conserved hypothetical protein; Unextendable partial coding region.
  
 
  0.485
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.