STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24856.1Putative integral membrane protein. (423 aa)    
Predicted Functional Partners:
EFL27778.1
Putative glucosyltransferase.
  
  
 0.802
EFL22063.1
Putative transferase; Truncated CDS; unextendable partial coding region; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.617
EFL23423.1
Conserved hypothetical protein.
  
     0.602
EFL22060.1
Transferase.
 
     0.567
EFL26630.1
Glycosyltransferase.
 
    0.530
EFL28452.1
Methyltransferase domain protein.
  
     0.529
EFL25532.1
Putative integral membrane protein.
  
     0.523
EFL27769.1
Putative membrane protein; Unextendable partial coding region.
  
    0.516
EFL27549.1
ISMsm3, transposase.
  
  
 0.515
EFL27550.1
Conserved hypothetical protein.
  
  
 0.515
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.