STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24856.1Putative integral membrane protein. (423 aa)    
Predicted Functional Partners:
EFL27778.1
Putative glucosyltransferase.
  
  
 0.712
EFL22063.1
Putative transferase; Truncated CDS; unextendable partial coding region; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.617
EFL23423.1
Conserved hypothetical protein.
  
     0.602
EFL22060.1
Transferase.
 
     0.567
EFL26630.1
Glycosyltransferase.
 
    0.540
EFL28452.1
Methyltransferase domain protein.
  
     0.529
EFL25532.1
Putative integral membrane protein.
  
     0.523
EFL22059.1
Putative glycosyltransferase.
 
    0.520
EFL25116.1
Mannan polymerase complex subunit Mnn9.
  
    0.506
EFL25896.1
PE-PGRS family protein.
  
    0.506
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.