STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24862.1D-amino-acid dehydrogenase small subunit. (199 aa)    
Predicted Functional Partners:
EFL26930.1
Glutamate synthase large subunit.
  
 
 0.775
EFL21394.1
D-amino-acid dehydrogenase small subunit.
  
     0.774
EFL20406.1
FAD dependent oxidoreductase/aminomethyl transferase; Belongs to the GcvT family.
  
 0.759
EFL21418.1
FAD dependent oxidoreductase/aminomethyl transferase; Belongs to the GcvT family.
  
 0.759
EFL23862.1
FAD dependent oxidoreductase.
  
 0.759
EFL28327.1
Putative 4-hydroxyphenylpyruvate dioxygenase; Truncated CDS; unextendable partial coding region.
   
 
 0.675
EFL25708.1
4-hydroxyphenylpyruvate dioxygenase.
   
 
  0.673
EFL26613.1
Putative N-methylproline demethylase.
  
 0.670
EFL20437.1
Sarcosine oxidase, delta subunit.
  
 0.667
EFL21377.1
Glycine dehydrogenase; Truncated CDS; Belongs to the GcvP family.
   
 
 0.648
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.