STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24864.1Putative IclR-family transcriptional regulator. (252 aa)    
Predicted Functional Partners:
EFL24727.1
Putative membrane protein.
     
 0.776
EFL28372.1
IclR family transcriptional regulator.
  
     0.772
EFL28382.1
IclR family transcriptional regulator.
  
     0.771
EFL29251.1
IclR family transcriptional regulator.
  
     0.771
EFL21710.1
IclR family transcriptional regulator.
  
     0.767
EFL28645.1
IclR family transcriptional regulator.
  
     0.767
EFL28291.1
IclR family transcriptional regulator; Truncated CDS; unextendable partial coding region.
  
     0.766
EFL29236.1
IclR family transcriptional regulator.
  
     0.765
EFL21416.1
IclR family transcriptional regulator.
  
     0.764
EFL29339.1
IclR family transcriptional regulator.
  
     0.758
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.