STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24872.1Aspartate aminotransferase. (399 aa)    
Predicted Functional Partners:
EFL24905.1
Aspartate kinase, monofunctional class; Belongs to the aspartokinase family.
 
 0.831
EFL26930.1
Glutamate synthase large subunit.
    
 0.825
EFL24871.1
Short chain dehydrogenase/reductase family oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.805
EFL21079.1
Prephenate dehydrogenase.
 
 
 0.762
EFL24873.1
Putative demethylmenaquinone methyltransferase.
       0.742
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
  
 
 0.739
EFL27376.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.734
EFL27228.1
Prephenate dehydrogenase.
  
 
 0.731
EFL21235.1
Asparagine synthase (glutamine-hydrolyzing).
  
  
 0.724
EFL20382.1
Aspartate ammonia-lyase.
     
 0.715
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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