STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24873.1Putative demethylmenaquinone methyltransferase. (223 aa)    
Predicted Functional Partners:
EFL20329.1
Putative demethylmenaquinone methyltransferase.
  
  
  0.818
EFL24871.1
Short chain dehydrogenase/reductase family oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.789
EFL24872.1
Aspartate aminotransferase.
       0.742
EFL29333.1
2-amino-3-carboxylmuconate-6-semialdehyde decarboxylase.
 
  
 0.710
EFL28281.1
Regulator of ribonuclease activity A.
  
     0.663
EFL27934.1
Putative 2-pyrone-4,6-dicarboxylic acid hydrolase; Truncated CDS.
 
   
 0.649
EFL27765.1
GlcNAc-PI de-N-acetylase.
    
 0.642
EFL20598.1
DlpA protein.
  
     0.631
EFL27646.1
Amidohydrolase 2.
 
  
 0.628
EFL28911.1
Putative citrate lyase, beta subunit.
    
  0.615
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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