STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24876.1Mucin-2 (MUC-2) (Intestinal mucin-2). (282 aa)    
Predicted Functional Partners:
EFL24875.1
LigA protein.
 
     0.931
EFL24874.1
Conserved hypothetical protein.
       0.648
EFL20867.1
Mucin; Tracheobronchial mucin.
  
     0.579
EFL26974.1
Conserved hypothetical protein.
  
     0.554
EFL24873.1
Putative demethylmenaquinone methyltransferase.
       0.504
EFL24970.1
Putative transcriptional regulator, LacI family; Belongs to the 'phage' integrase family.
  
     0.478
EFL24871.1
Short chain dehydrogenase/reductase family oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.472
EFL24872.1
Aspartate aminotransferase.
       0.472
EFL28540.1
Spore-associated protein A.
  
     0.472
EFL24780.1
Hypothetical protein.
  
 
 0.454
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.