STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24877.1Non-specific serine/threonine protein kinase. (246 aa)    
Predicted Functional Partners:
EFL22310.1
Putative secreted protein.
 
 0.940
EFL26791.1
Cytochrome c family protein.
  
 0.923
EFL27376.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
  0.887
EFL22260.1
Isochorismatase.
  
    0.853
EFL26930.1
Glutamate synthase large subunit.
    
 0.844
EFL28121.1
NHL repeat containing protein.
    
 0.841
EFL29061.1
Putative fusidic acid esterase.
 
 
 0.808
EFL20721.1
Conserved hypothetical protein.
 
 
 0.802
EFL20339.1
Putative alanine-rich protein.
   
 0.773
EFL20952.1
Putative glycosyl hydrolase.
   
 0.773
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.