STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24884.1Winged helix family transcriptional regulator. (1058 aa)    
Predicted Functional Partners:
EFL23098.1
Regulatory protein AfsR.
 
  
 0.514
EFL22290.1
Putative TetR-family transcriptional regulator.
  
    0.487
EFL28438.1
Transcriptional regulator.
 
  
 0.480
EFL26348.1
Hypothetical protein.
  
    0.476
EFL22024.1
PE-PGRS family protein.
  
     0.471
EFL24885.1
Conserved hypothetical protein.
       0.470
EFL24509.1
Peptidase propeptide and YPEB domain protein.
   
    0.459
EFL21652.1
Glyoxalase.
   
    0.457
EFL22360.1
NAD-dependent deacetylase 2.
   
    0.454
EFL27741.1
Conserved hypothetical protein; Unextendable partial coding region.
   
    0.454
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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