STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24890.1PE-PGRS family protein. (429 aa)    
Predicted Functional Partners:
EFL24891.1
Putative ATPase family associated with various cellular activities (AAA).
 
 
 0.999
EFL21984.1
Putative limonene-1,2-epoxide hydrolase.
  
     0.749
EFL21983.1
NAD-dependent epimerase/dehydratase.
  
     0.632
EFL23302.1
Putative limonene-1,2-epoxide hydrolase.
  
     0.589
EFL24892.1
Hypothetical protein; Truncated CDS; unextendable partial coding region.
       0.559
EFL21958.1
Conserved hypothetical protein.
  
     0.536
EFL28602.1
LigA protein; Unextendable partial coding region.
  
     0.532
EFL21957.1
Putative integrase.
  
     0.504
EFL23303.1
NAD-dependent epimerase/dehydratase.
  
     0.489
EFL29367.1
Transposase.
  
     0.480
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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