Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL24919.1Putative membrane protein. (489 aa)    
Predicted Functional Partners:
rsmG
16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.808
EFL28446.1
PE-PGRS family protein.
  
     0.710
EFL24918.1
Putative Sodium/hydrogen exchanger family protein.
     
 0.663
EFL24917.1
Putative TrkA-C domain protein.
       0.661
EFL22687.1
Hypothetical protein.
   
    0.630
EFL25921.1
Conserved hypothetical protein.
 
     0.585
EFL20723.1
Putative secreted protein.
  
     0.557
EFL27279.1
IucA/IucC.
  
     0.544
EFL25923.1
PE-PGRS family protein.
  
     0.542
EFL22031.1
Conserved hypothetical protein.
  
     0.540
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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