STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24929.1Ion-transporting ATPase. (447 aa)    
Predicted Functional Partners:
EFL24930.1
Putative ATPase /MT3781.
 
    
0.856
EFL24933.1
NUDIX family hydrolase.
 
   
 0.831
EFL26806.1
Cyclase/dehydrase.
 
     0.757
EFL24931.1
Conserved hypothetical protein.
       0.743
EFL24932.1
Endoribonuclease L-PSP family protein.
       0.743
EFL24228.1
Acyltransferase.
  
     0.742
EFL24934.1
Putative hydrolase.
 
   
 0.737
EFL25109.1
Conserved hypothetical protein.
  
     0.725
EFL24229.1
UDP-glucose 4-epimerase.
  
     0.715
EFL24321.1
PbsX family transcriptional regulator.
  
     0.674
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.