STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24935.1crp/Fnr family transcriptional regulator. (224 aa)    
Predicted Functional Partners:
EFL22809.1
Sensor histidine kinase/response regulator.
  
 0.953
EFL25492.1
Adenylate cyclase (ATP pyrophosphate-lyase) (Adenylylcyclase).
 
 0.931
EFL28265.1
Putative LigA.
   
 0.888
EFL27138.1
Sensor histidine kinase/response regulator.
   
 0.871
EFL26930.1
Glutamate synthase large subunit.
    
 0.859
EFL22676.1
Putative transcriptional regulator with cyclic nucleotide-binding domain (CrP/Fnr-family).
  
  
 
0.848
EFL21664.1
Putative transcriptional regulator with cyclic nucleotide-binding domain (CrP/Fnr-family).
  
  
 
0.840
EFL20795.1
Modular polyketide synthase.
     
 0.755
EFL20798.1
Modular polyketide synthase; Unextendable partial coding region.
     
 0.755
EFL20814.1
Modular polyketide synthase.
     
 0.755
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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