STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24948.1Putative septum site determining protein. (369 aa)    
Predicted Functional Partners:
EFL27778.1
Putative glucosyltransferase.
  
 
 0.970
EFL24949.1
Type II/IV secretion system protein.
       0.882
EFL27549.1
ISMsm3, transposase.
  
 0.854
EFL27550.1
Conserved hypothetical protein.
  
 0.854
EFL24951.1
Putative integral membrane protein.
 
     0.736
EFL28143.1
Modular polyketide synthase; Overlaps another CDS with the same product name.
  
 
 0.712
EFL24950.1
Putative integral membrane protein.
 
     0.692
EFL23442.1
Conserved hypothetical protein.
  
     0.587
EFL24151.1
NADH dehydrogenase I, E subunit.
     
 0.583
EFL25487.1
Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
    
   0.582
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.