STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24966.1Putative FHA domain protein. (477 aa)    
Predicted Functional Partners:
EFL24965.1
Putative tetratricopeptide repeat protein.
 
     0.845
EFL24967.1
Aminotransferase, class III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.773
EFL24968.1
Nodulation protein nolNO.
       0.639
EFL24969.1
Hypothetical protein.
       0.639
EFL24964.1
Peptidase E (Alpha-aspartyl dipeptidase) (Asp-specificdipeptidase) (Dipeptidase E); Belongs to the peptidase S51 family.
       0.581
EFL21747.1
Small heat shock protein C2; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.519
EFL24495.1
Putative heat shock protein; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.519
EFL27706.1
Hsp20-like protein; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.519
EFL28478.1
roadblock/LC7 domain protein; Truncated CDS.
  
     0.456
EFL25510.1
ATP/GTP-binding protein.
  
     0.424
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.