Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL24981.1Putative integrase; Belongs to the 'phage' integrase family. (482 aa)    
Predicted Functional Partners:
EFL24979.1
Conserved hypothetical protein.
       0.882
EFL24980.1
Conserved hypothetical protein.
       0.882
EFL24978.1
Conserved hypothetical protein.
       0.864
EFL23140.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
 0.675
EFL21958.1
Conserved hypothetical protein.
  
     0.644
EFL21957.1
Putative integrase.
  
     0.641
EFL20366.1
Putative transposase.
  
     0.624
EFL23624.1
Putative transposase.
  
     0.624
EFL24484.1
Putative transposase.
  
     0.624
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
     
  0.602
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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