STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24995.1Conserved hypothetical protein. (472 aa)    
Predicted Functional Partners:
EFL23393.1
Putative ATP-dependent DNA helicase PcrA.
  
 0.994
EFL22753.1
RecQ family ATP-dependent DNA helicase; Truncated CDS.
  
 0.933
EFL20951.1
ATP-dependent DNA helicase RecQ.
  
 0.928
recA
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
 0.905
EFL21138.1
Putative nuclease sbcCD subunit C.
  
 0.901
EFL24998.1
Secretion protein Snm4.
 
     0.848
EFL22766.1
ATP-dependent helicase DinG.
   
 0.818
EFL24996.1
FtsK/SpoIIIE family protein.
 
   
 0.815
EFL25004.1
Conserved hypothetical protein.
 
     0.809
EFL26320.1
Conserved hypothetical protein.
 
     0.803
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.