STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24999.1Conserved hypothetical protein. (133 aa)    
Predicted Functional Partners:
EFL24998.1
Secretion protein Snm4.
 
  
 0.937
EFL25002.1
Conserved hypothetical protein.
 
     0.908
EFL25004.1
Conserved hypothetical protein.
 
     0.895
EFL25001.1
Conserved hypothetical protein.
       0.889
EFL25005.1
Conserved hypothetical protein.
 
     0.881
EFL24996.1
FtsK/SpoIIIE family protein.
 
    0.839
EFL26320.1
Conserved hypothetical protein.
 
     0.804
EFL24995.1
Conserved hypothetical protein.
 
     0.799
EFL25000.1
LigA protein.
     
 0.796
EFL25016.1
Conserved hypothetical protein.
 
     0.791
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.