Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL25005.1Conserved hypothetical protein. (110 aa)    
Predicted Functional Partners:
EFL25004.1
Conserved hypothetical protein.
 
     0.928
EFL25002.1
Conserved hypothetical protein.
 
     0.885
EFL24999.1
Conserved hypothetical protein.
 
     0.880
EFL24998.1
Secretion protein Snm4.
 
     0.846
EFL24996.1
FtsK/SpoIIIE family protein.
 
     0.812
EFL25016.1
Conserved hypothetical protein.
 
     0.793
EFL24995.1
Conserved hypothetical protein.
 
     0.787
EFL25772.1
Conserved hypothetical protein.
 
     0.768
EFL25014.1
Conserved hypothetical protein.
 
     0.765
EFL26318.1
Conserved hypothetical protein.
 
     0.761
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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