STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL25009.1Conserved hypothetical protein. (268 aa)    
Predicted Functional Partners:
EFL28887.1
Putative S4 domain protein.
  
    0.799
EFL25012.1
Conserved hypothetical protein.
       0.691
EFL25011.1
Conserved hypothetical protein.
       0.675
EFL25013.1
Conserved hypothetical protein.
       0.674
EFL25010.1
Conserved hypothetical protein.
       0.668
EFL25014.1
Conserved hypothetical protein.
       0.668
EFL25015.1
Conserved hypothetical protein.
       0.668
EFL25016.1
Conserved hypothetical protein.
       0.570
EFL25017.1
Conserved hypothetical protein.
       0.497
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.