STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL25014.1Conserved hypothetical protein. (887 aa)    
Predicted Functional Partners:
EFL25016.1
Conserved hypothetical protein.
 
     0.918
EFL25017.1
Conserved hypothetical protein.
 
     0.894
EFL25015.1
Conserved hypothetical protein.
       0.780
EFL25004.1
Conserved hypothetical protein.
 
     0.775
EFL25010.1
Conserved hypothetical protein.
       0.773
EFL25011.1
Conserved hypothetical protein.
       0.773
EFL25012.1
Conserved hypothetical protein.
       0.773
EFL25013.1
Conserved hypothetical protein.
       0.773
EFL24999.1
Conserved hypothetical protein.
  
     0.768
EFL24998.1
Secretion protein Snm4.
  
     0.767
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.