STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL25021.1Putative PRC-barrel domain protein. (118 aa)    
Predicted Functional Partners:
EFL25022.1
Beta-glucanase (Endo-beta-1,3-1,4 glucanase).
       0.739
EFL24486.1
Conserved hypothetical protein.
  
    0.687
EFL25023.1
Hypothetical protein.
       0.665
EFL26827.1
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
   
  
 0.647
EFL22321.1
Catalase HPII.
  
  
 0.609
EFL25076.1
Glycine betaine/choline-binding protein of an ABC-type transport system.
  
    0.583
EFL25549.1
Glycine betaine/choline-binding protein of an ABC-type transport system.
  
    0.583
EFL25020.1
Conserved domain protein.
       0.562
EFL26020.1
Bacterial membrane flanked domain protein.
  
    0.494
EFL21378.1
Putative PRC-barrel domain protein.
  
  
 
0.474
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.