Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL25029.1Hypothetical protein. (143 aa)    
Predicted Functional Partners:
EFL25027.1
LuxR family DNA-binding response regulator.
       0.882
EFL25028.1
LigA protein.
       0.882
EFL25031.1
Conserved hypothetical protein.
       0.541
EFL25033.1
Glycosyl transferase, group 2.
       0.524
EFL25032.1
Putative glycosyl transferase.
       0.502
EFL25025.1
Histidine protein kinase sensor protein (putative).
       0.497
EFL25026.1
LuxR family DNA-binding response regulator.
       0.497
EFL25030.1
Putative LigA.
       0.487
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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